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SRX003520: 454 whole genome shotgun sequencing of genomic DNA paired-end library '454-1803' containing sample 'Acidaminococcus sp. D21'
1 LS454 (454 GS FLX) run: 274,685 spots, 79.7M bases, 157.5Mb downloads

UUID: dfc99cd5-6d16-41da-a120-8b5b7288fb9e
Design: 15X fragment; 30X physical paired
Submitted by: Broad Institute (BI)
Study: Reference genome for the Human Microbiome Project
PRJNA34117 • SRP001647 • All experiments • All runs
show Abstracthide Abstract
<b><i>Acidaminococcus</i> sp. D21</b>. This strain was isolated from the human gastrointestinal tract. It will be sequenced for comparative genome analysis.
Sample: Generic sample from Acidaminococcus sp. D21
SAMN00102964 • SRS002798 • All experiments • All runs
Organism: Acidaminococcus intestini
Library:
Name: 454-1803
Instrument: 454 GS FLX
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
          barcode
Group tagBasecalls
PragueATCTTAC
12  forward           reverse

Experiment attributes: (show all 5 attributes...) (hide...)
gssr_id: 16654.2
lsid: BROAD:SEQUENCING_SAMPLE:16654.2
material_type: Genomic DNA
project: G1745
work_request: 17623
Pipeline: show...hide...
NameStepProgramVersion
base caller2009-03-19 10:02:18.0454BaseCaller2.0.00.17
Runs: 1 run, 274,685 spots, 79.7M bases, 157.5Mb
Run# of Spots# of BasesSizePublished
SRR137148274,68579.7M157.5Mb2011-03-24

ID:
3685

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